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1Department of Medical Mycology, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
2Department of Medical Genetics, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
3Infectious and Tropical Diseases Research Center, Health Research Institute, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
4Thalassemia and Hemoglobinopathy Research Center, Health Research Institute, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran
©2020, Korean Society of Epidemiology
This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
CONFLICT OF INTEREST
The authors have no conflicts of interest to declare for this study.
FUNDING
This study was supported by Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran (No. OG-9743).
AUTHOR CONTRIBUTIONS
Conceptualization: MF. Data curation: EA, MH. Formal analysis: EA. Funding acquisition: MF. Methodology: EA, MTB, MF. Project administration: MF. Writing – original draft: EA. Writing – review & editing: MTB, MF, MH.
Primers | Reference |
---|---|
ITS1 5´-TCC-GTA-GGT-GAA-CCTGCG-G-3´ | [9] |
ITS4 5´-TCC-TCC-GCT-TAT-TGA-TAT-GC-3´ | |
CALF 5´-TGGTAAGGCGGGATCGCTT-3´ | [13] |
CALR 5´-GGTCAAAGTTTGAAGATATAC-3´ | |
CDUF 5´-AA ACTTGTCACGAGATTATTTTT-3´ | [13] |
CDUR 5´-AAA GTTTGAAGAATAAAATGGC-3 |
Variables | Colonized (n=88) | Non-colonized (n=113) | p-value1 |
---|---|---|---|
Sex | |||
Male | 63 (54.8) | 52 (45.2) | <0.001 |
Female | 25 (29.1) | 61 (70.9) | |
Drug injection | |||
True | 47 (57.3) | 35 (42.7) | 0.001 |
False | 41 (34.5) | 78 (65.5) | |
TB | |||
Yes | 15 (68.2) | 7 (31.8) | 0.015 |
No | 73 (40.8) | 106 (59.2) | |
TB prophylaxis | |||
Yes | 6 (30.0) | 14 (70.0) | 0.191 |
No | 82 (45.3) | 99 (54.7) | |
PCP | |||
Positive | 12 (63.2) | 7 (36.8) | 0.074 |
Negative | 76 (41.8) | 106 (58.2) | |
ARV | |||
Yes | 85 (42.9) | 113 (57.1) | 0.082 |
No | 3 (100) | 0 (0.0) | |
Blood transfusion | |||
True | 1 (100) | 0 (0.0) | 0.438 |
False | 87 (43.5) | 113 (56.5) | |
Mother-to-child transmission | |||
True | 3 (60.0) | 2 (40.0) | 0.655 |
False | 85 (43.4) | 111 (56.6) | |
Addiction history | |||
Yes | 51 (49.5) | 52 (50.5) | 0.093 |
No | 37 (37.8) | 61 (62.2) | |
Education | |||
No education | 11 (57.9) | 8 (42.1) | 0.1932 |
Elementary education | 75 (41.7) | 105 (58.2) | |
Higher education | 2 (100) | 0 (0.0) | |
Homosexuality | |||
True | 5 (71.4) | 2 (28.6) | 0.244 |
False | 83 (42.8) | 111 (57.2) | |
HCV Ag | |||
Positive | 31 (50.0) | 31 (50.0) | 0.235 |
Negative | 57 (41.0) | 82 (59.0) | |
HBV Ag | |||
Positive | 4 (50.0) | 4 (50.0) | 0.732 |
Negative | 84 (43.5) | 109 (56.5) | |
Occupational exposure | |||
True | 1 (50.0) | 1 (50.0) | 1.000 |
False | 87 (43.7) | 112 (56.3) | |
Shared injection history | |||
Yes | 37 (72.5) | 14 (27.5) | <0.001 |
No | 51 (34.0) | 99 (66.0) | |
CD4 count (cells/mm3) | |||
≤200 | 20 (80.0) | 5 (20.0) | <0.001 |
>200 | 68 (38.6) | 108 (61.4) |
Values are presented as number (%).
TB, tuberculosis; PCP, Pneumocystis carinii pneumonia; ARV, antiretroviral; HCV, hepatitis C virus; HBV, hepatitis B virus; Ag, antigen.
1 Chi-square test or Fisher exact test.
2 Tests were performed after pooling the last 2 groups (elementary education, higher education) in order to eliminate small expected frequencies.
Variables |
Colonized |
Non-colonized |
p-value1 | ||
---|---|---|---|---|---|
n | Mean±SD | n | Mean±SD | ||
Age | 88 | 40.61±12.55 | 113 | 37.15±8.18 | 0.005 |
Viral load | 36 | 802,637.71±2,544,107.27 | 27 | 3,150,032.340±11,343,051.38 | 0.064 |
Candida load | 88 | 5,787.51±23,256.64 | 58 | 3.50±2.12 | <0.001 |
Variables | OR (95% CI) | p-value |
---|---|---|
Sex (ref: female) | 3.59 (1.23, 10.46) | 0.019 |
Age | 1.01 (0.98, 1.04) | 0.376 |
Drug injection (ref: false) | 0.78 (0.22, 2.68) | 0.697 |
TB (ref: no) | 1.75 (0.55, 5.57) | 0.341 |
TB prophylaxis (ref: no) | 0.65 (0.21, 2.03) | 0.466 |
PCP (ref: negative) | 1.10 (0.31, 3.89) | 0.872 |
Addiction history (ref: no) | 0.28 (0.07, 1.03) | 0.056 |
Education (ref: yes) | 1.98 (0.64, 6.17) | 0.234 |
Shared injection history (ref: no) | 6.96 (2.46, 19.65) | <0.001 |
CD4 (ref: >200) | 4.62 (1.43, 14.90) | 0.010 |
Hosmer–Lemeshow test1: χ2=8.49, p=0.387 |
Primers | Reference |
---|---|
ITS1 5´-TCC-GTA-GGT-GAA-CCTGCG-G-3´ | [9] |
ITS4 5´-TCC-TCC-GCT-TAT-TGA-TAT-GC-3´ | |
CALF 5´-TGGTAAGGCGGGATCGCTT-3´ | [13] |
CALR 5´-GGTCAAAGTTTGAAGATATAC-3´ | |
CDUF 5´-AA ACTTGTCACGAGATTATTTTT-3´ | [13] |
CDUR 5´-AAA GTTTGAAGAATAAAATGGC-3 |
Variables | Colonized (n=88) | Non-colonized (n=113) | p-value |
---|---|---|---|
Sex | |||
Male | 63 (54.8) | 52 (45.2) | <0.001 |
Female | 25 (29.1) | 61 (70.9) | |
Drug injection | |||
True | 47 (57.3) | 35 (42.7) | 0.001 |
False | 41 (34.5) | 78 (65.5) | |
TB | |||
Yes | 15 (68.2) | 7 (31.8) | 0.015 |
No | 73 (40.8) | 106 (59.2) | |
TB prophylaxis | |||
Yes | 6 (30.0) | 14 (70.0) | 0.191 |
No | 82 (45.3) | 99 (54.7) | |
PCP | |||
Positive | 12 (63.2) | 7 (36.8) | 0.074 |
Negative | 76 (41.8) | 106 (58.2) | |
ARV | |||
Yes | 85 (42.9) | 113 (57.1) | 0.082 |
No | 3 (100) | 0 (0.0) | |
Blood transfusion | |||
True | 1 (100) | 0 (0.0) | 0.438 |
False | 87 (43.5) | 113 (56.5) | |
Mother-to-child transmission | |||
True | 3 (60.0) | 2 (40.0) | 0.655 |
False | 85 (43.4) | 111 (56.6) | |
Addiction history | |||
Yes | 51 (49.5) | 52 (50.5) | 0.093 |
No | 37 (37.8) | 61 (62.2) | |
Education | |||
No education | 11 (57.9) | 8 (42.1) | 0.193 |
Elementary education | 75 (41.7) | 105 (58.2) | |
Higher education | 2 (100) | 0 (0.0) | |
Homosexuality | |||
True | 5 (71.4) | 2 (28.6) | 0.244 |
False | 83 (42.8) | 111 (57.2) | |
HCV Ag | |||
Positive | 31 (50.0) | 31 (50.0) | 0.235 |
Negative | 57 (41.0) | 82 (59.0) | |
HBV Ag | |||
Positive | 4 (50.0) | 4 (50.0) | 0.732 |
Negative | 84 (43.5) | 109 (56.5) | |
Occupational exposure | |||
True | 1 (50.0) | 1 (50.0) | 1.000 |
False | 87 (43.7) | 112 (56.3) | |
Shared injection history | |||
Yes | 37 (72.5) | 14 (27.5) | <0.001 |
No | 51 (34.0) | 99 (66.0) | |
CD4 count (cells/mm3) | |||
≤200 | 20 (80.0) | 5 (20.0) | <0.001 |
>200 | 68 (38.6) | 108 (61.4) |
Variables | Colonized |
Non-colonized |
p-value |
||
---|---|---|---|---|---|
n | Mean±SD | n | Mean±SD | ||
Age | 88 | 40.61±12.55 | 113 | 37.15±8.18 | 0.005 |
Viral load | 36 | 802,637.71±2,544,107.27 | 27 | 3,150,032.340±11,343,051.38 | 0.064 |
Candida load | 88 | 5,787.51±23,256.64 | 58 | 3.50±2.12 | <0.001 |
Variables | OR (95% CI) | p-value |
---|---|---|
Sex (ref: female) | 3.59 (1.23, 10.46) | 0.019 |
Age | 1.01 (0.98, 1.04) | 0.376 |
Drug injection (ref: false) | 0.78 (0.22, 2.68) | 0.697 |
TB (ref: no) | 1.75 (0.55, 5.57) | 0.341 |
TB prophylaxis (ref: no) | 0.65 (0.21, 2.03) | 0.466 |
PCP (ref: negative) | 1.10 (0.31, 3.89) | 0.872 |
Addiction history (ref: no) | 0.28 (0.07, 1.03) | 0.056 |
Education (ref: yes) | 1.98 (0.64, 6.17) | 0.234 |
Shared injection history (ref: no) | 6.96 (2.46, 19.65) | <0.001 |
CD4 (ref: >200) | 4.62 (1.43, 14.90) | 0.010 |
Hosmer–Lemeshow test |
Species | Isolation rate by species, n (%) | Isolation rate by patients, % |
---|---|---|
Candida albicans | 61 (48.0) | 69.3 |
Candida dubliniensis | 29 (22.8) | 32.9 |
Candida glabrata | 18 (14.1) | 20.4 |
Candida tropicalis | 8 (6.2) | 9.1 |
Candida parapsilosis | 5 (3.9) | 5.6 |
Candida guilliermondii | 3 (2.3) | 3.4 |
Candida kefyr | 3 (2.3) | 3.4 |
Candida krusei | 1 (0.7) | 1.1 |
Mixed colonization of species | Patients, n (%) |
---|---|
C. albicans+C. dubliniensis | 6 (6.8) |
C. albicans+C. glabrata | 5 (5.6) |
C. albicans+C. dublinensis+C. glabrata | 4 (4.5) |
C. dubiliansis+C. glabrata | 4 (4.5) |
C. albicans+C. tropicalis | 2 (2.2) |
C. albicans+ C. guilliermondii | 2 (2.2) |
C. albicans+C. dubilinensis+C. kefyr | 1 (1.1) |
C. albicans+C. glabrata+C. tropicalis | 1 (1.1) |
C. dubiliansis+C. parapsilosis | 1 (1.1) |
C. dubilinensis+C. tropicalis | 1 (1.1) |
C. glabrata+C. tropicalis | 1 (1.1) |
C. dubilinensis+C. kefyr | 1 (1.1) |
Values are presented as number (%). TB, tuberculosis; PCP, Chi-square test or Fisher exact test. Tests were performed after pooling the last 2 groups (elementary education, higher education) in order to eliminate small expected frequencies.
SD, standard deviation. Mann-Whitney test.
OR, odds ratio; CI, confidence interval; TB, tuberculosis; PCP, The Hosmer–Lemeshow test is a statistical test for goodness-of-fit for logistic regression models. It is used frequently in risk prediction models.